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Articles containing the keyword 'hyperspectral'

Category : Research article

article id 22028, category Research article
Eelis Halme, Matti Mõttus. (2023). Improved parametrisation of a physically-based forest reflectance model for retrieval of boreal forest structural properties. Silva Fennica vol. 57 no. 2 article id 22028. https://doi.org/10.14214/sf.22028
Keywords: forest structure; Sentinel-2; reflectance; hyperspectral; tree distribution
Highlights: Spatial distribution of trees is a key driver for forest reflectance; Knowledge of the ratio of branch to leaf area improves forest reflectance simulation substantially; Different optical properties of the two leaf sides have a notable effect on forest reflectance.
Abstract | Full text in HTML | Full text in PDF | Author Info
Physically-based reflectance models offer a robust and transferable method to assess biophysical characteristics of vegetation in remote sensing. Forests exhibit explicit structure at many scales, from shoots and branches to landscape patches, and hence present a specific challenge to vegetation reflectance modellers. To relate forest reflectance with its structure, the complexity must be parametrised leading to an increase in the number of reflectance model inputs. The parametrisations link reflectance simulations to measurable forest variables, but at the same time rely on abstractions (e.g. a geometric surface forming a tree crown) and physically-based simplifications that are difficult to quantify robustly. As high-quality data on basic forest structure (e.g. tree height and stand density) and optical properties (e.g. leaf and forest floor reflectance) are becoming increasingly available, we used the well-validated forest reflectance and transmittance model FRT to investigate the effect of the values of the “uncertain” input parameters on the accuracy of modelled forest reflectance. With the state-of-the-art structural and spectral forest information, and Sentinel-2 Multispectral Instrument imagery, we identified that the input parameters influencing the most the modelled reflectance, given that the basic forestry variables are set to their true values and leaf mass is determined from reliable allometric models, are the regularity of the tree distribution and the amount of woody elements. When these parameters were set to their new adjusted values, the model performance improved considerably, reaching in the near infrared spectral region (740–950 nm) nearly zero bias, a relative RMSE of 13% and a correlation coefficient of 0.81. In the visible part of the spectrum, the model performance was not as consistent indicating room for improvement.
article id 10606, category Research article
Benjamin Allen, Michele Dalponte, Ari M. Hietala, Hans Ole Ørka, Erik Næsset, Terje Gobakken. (2022). Detection of Root, Butt, and Stem Rot presence in Norway spruce with hyperspectral imagery. Silva Fennica vol. 56 no. 2 article id 10606. https://doi.org/10.14214/sf.10606
Keywords: Picea abies; Heterobasidion; remote sensing; root rot; hyperspectral imagery; forest pathology
Highlights: Hyperspectral imagery can be used to detect Root, Butt, and Stem Rot in Picea abies with moderate accuracy; Spectral derivatives improved classification accuracy; Bands around 540, 700, and 1650 nm tended to be the most important for classification models.
Abstract | Full text in HTML | Full text in PDF | Author Info

Pathogenic wood decay fungi such as species of Heterobasidion are some of the most serious forest pathogens in Europe, causing rot of tree boles and loss of growth, with estimated economic losses of eight hundred million euros per year. In conifers with low resinous heartwood such as species of Picea and Abies, these fungi are commonly confined to heartwood and thus external infection signs on the bark or foliage of trees are normally absent. Consequently, determining the extent of disease presence in a forest stand with field surveys is not practical for guiding forest management decisions such as optimal rotation time. Remote sensing technologies such as airborne laser scanning and aerial imagery are already used to reduce the reliance on fieldwork in forest inventories. This study aimed to use remote sensing to detect rot in spruce (Picea abies L. Karst.) forests in Norway. An airborne hyperspectral imager provided information for classifying the presence or absence of rot in a single-tree-based framework. Ground reference data showing the presence of rot were collected by harvest machine operators during the harvest of forest stands. Random forest and support vector machine algorithms were used to classify the presence and absence of rot. Results indicate a 64% overall classification accuracy for presence-absence classification of rot, although additional work remains to make the classifications usable for practical forest management.

  • Allen, Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, P.O. Box 5003, NO-1432 Ås, Norway E-mail: benjamin.allen@nmbu.no (email)
  • Dalponte, Department of Sustainable Agro-ecosystems and Bioresources, Research and Innovation Centre, Fondazione E. Mach, Via E. Mach 1, 38098 San Michele all’Adige (TN), Italy E-mail: michele.dalponte@fmach.it
  • Hietala, Norwegian Institute of Bioeconomy Research, Innocamp Steinkjer, Skolegata 22, NO-7713 Steinkjer, Norway E-mail: Ari.Hietala@nibio.no
  • Ørka, Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, P.O. Box 5003, NO-1432 Ås, Norway E-mail: hans-ole.orka@nmbu.no
  • Næsset, Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, P.O. Box 5003, NO-1432 Ås, Norway E-mail: erik.naesset@nmbu.no
  • Gobakken, Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, P.O. Box 5003, NO-1432 Ås, Norway E-mail: terje.gobakken@nmbu.no
article id 10244, category Research article
Hans Ole Ørka, Endre H. Hansen, Michele Dalponte, Terje Gobakken, Erik Næsset. (2021). Large-area inventory of species composition using airborne laser scanning and hyperspectral data. Silva Fennica vol. 55 no. 4 article id 10244. https://doi.org/10.14214/sf.10244
Keywords: airborne laser scanning; Dirichlet regression; hyperspectral; species proportions; species-specific forest inventory
Highlights: A methodology for using hyperspectral data in the area-based approach is presented; Hyperspectral data produced satisfactory results for species composition in 90% of the cases; Parametric Dirichlet regression is an applicable method to predicting species proportions; Normalization and a tree-based selection of pixels provided the overall best results; Both visible to near-infrared and shortwave-infrared sensors gave acceptable results.
Abstract | Full text in HTML | Full text in PDF | Author Info

Tree species composition is an essential attribute in stand-level forest management inventories and remotely sensed data might be useful for its estimation. Previous studies on this topic have had several operational drawbacks, e.g., performance studied at a small scale and at a single tree-level with large fieldwork costs. The current study presents the results from a large-area inventory providing species composition following an operational area-based approach. The study utilizes a combination of airborne laser scanning and hyperspectral data and 97 field sample plots of 250 m2 collected over 350 km2 of productive forest in Norway. The results show that, with the availability of hyperspectral data, species-specific volume proportions can be provided in operational forest management inventories with acceptable results in 90% of the cases at the plot level. Dominant species were classified with an overall accuracy of 91% and a kappa-value of 0.73. Species-specific volumes were estimated with relative root mean square differences of 34%, 87%, and 102% for Norway spruce (Picea abies (L.) Karst.), Scots pine (Pinus sylvestris L.), and deciduous species, respectively. A novel tree-based approach for selecting pixels improved the results compared to a traditional approach based on the normalized difference vegetation index.

  • Ørka, Norwegian University of Life Sciences, Faculty of Environmental Sciences and Natural Resource Management, P.O. Box 5003, NO-1432 Ås, Norway ORCID https://orcid.org/0000-0002-7492-8608 E-mail: hans-ole.orka@nmbu.no (email)
  • Hansen, Norwegian University of Life Sciences, Faculty of Environmental Sciences and Natural Resource Management, P.O. Box 5003, NO-1432 Ås, Norway; Norwegian Forest Extension Institute, Honnevegen 60, NO-2836 Biri, Norway ORCID https://orcid.org/0000-0001-5174-4497 E-mail: eh@skogkurs.no
  • Dalponte, Department of Sustainable Agro-ecosystems and Bioresources, Research and Innovation Centre, Fondazione E. Mach, Via E. Mach 1, 38010 San Michele all’Adige, TN, Italy ORCID https://orcid.org/0000-0001-9850-8985 E-mail: michele.dalponte@fmach.it
  • Gobakken, Norwegian University of Life Sciences, Faculty of Environmental Sciences and Natural Resource Management, P.O. Box 5003, NO-1432 Ås, Norway ORCID https://orcid.org/0000-0001-5534-049X E-mail: terje.gobakken@nmbu.no
  • Næsset, Norwegian University of Life Sciences, Faculty of Environmental Sciences and Natural Resource Management, P.O. Box 5003, NO-1432 Ås, Norway E-mail: erik.naesset@nmbu.no
article id 10331, category Research article
Jussi Juola, Aarne Hovi, Miina Rautiainen. (2020). Multiangular spectra of tree bark for common boreal tree species in Europe. Silva Fennica vol. 54 no. 4 article id 10331. https://doi.org/10.14214/sf.10331
Keywords: classification; reflectance; hyperspectral; imaging spectrometer; near-infrared; SVM; visible
Highlights: Novel multiangular measurement set-up for hyperspectral imaging; Multiangular spectra of silver birch (Betula pendula), Scots pine (Pinus sylvestris) and Norway spruce (Picea abies) stem bark samples were collected; Intra- and interspecific variations in reflectance were analyzed; Demonstration of tree species identification based on stem bark spectra; Collected spectra openly available in SPECCHIO Spectral Information System.
Abstract | Full text in HTML | Full text in PDF | Author Info

Despite the importance of spectral properties of woody tree structures, they are seldom represented in research related to forests, remote sensing, and reflectance modeling. This study presents a novel imaging multiangular measurement set-up that utilizes a mobile handheld hyperspectral camera (Specim IQ, 400–1000 nm), and can measure stem bark spectra in a controlled laboratory setting. We measured multiangular reflectance spectra of silver birch (Betula pendula Roth), Scots pine (Pinus sylvestris L.) and Norway spruce (Picea abies (L.) Karst.) stem bark, and demonstrated the potential of using bark spectra in identifying tree species using a Support Vector Machine (SVM) based approach. Intraspecific reflectance variability was the lowest in visible (400–700 nm), and the highest in near-infrared (700–1000 nm) wavelength regions. Interspecific variation was the largest in the red, red-edge and near-infrared spectral bands. Spatial variation of reflectance along the tree height and different sides of the stem (north and south) were found. Both birch and pine had increased reflectance in the forward-scattering directions for visible to near-infrared wavelength regions, whilst spruce displayed the same only for the visible wavelength region. In addition, spruce had increased reflectance in the backward-scattering directions. In spite of the intraspecific variations, SVM could identify tree species with 88.8% overall accuracy when using pixel-specific spectra, and with 97.2% overall accuracy when using mean spectra per image. Based on our results it is possible to identify common boreal tree species based on their stem bark spectra using images from mobile hyperspectral cameras.

  • Juola, Aalto University, School of Engineering, Department of Built Environment, P.O. Box 14100, FI-00760 Aalto, Finland ORCID https://orcid.org/0000-0002-6050-7247 E-mail: jussi.juola@aalto.fi (email)
  • Hovi, Aalto University, School of Engineering, Department of Built Environment, P.O. Box 14100, FI-00760 Aalto, Finland ORCID https://orcid.org/0000-0002-4384-5279 E-mail: aarne.hovi@aalto.fi
  • Rautiainen, Aalto University, School of Engineering, Department of Built Environment, P.O. Box 14100, FI-00760 Aalto, Finland; Aalto University, School of Electrical Engineering, Department of Electronics and Nanoengineering, P.O. Box 15500, FI-00760 Aalto, Finland ORCID https://orcid.org/0000-0002-6568-3258 E-mail: miina.a.rautiainen@aalto.fi
article id 7721, category Research article
Sakari Tuominen, Andras Balazs, Eija Honkavaara, Ilkka Pölönen, Heikki Saari, Teemu Hakala, Niko Viljanen. (2017). Hyperspectral UAV-imagery and photogrammetric canopy height model in estimating forest stand variables. Silva Fennica vol. 51 no. 5 article id 7721. https://doi.org/10.14214/sf.7721
Keywords: forest inventory; digital photogrammetry; aerial imagery; hyperspectral imaging; radiometric calibration; UAVs; stereo-photogrammetric canopy modelling
Highlights: Hyperspectral imagery and photogrammetric 3D point cloud based on RGB imagery were acquired under weather conditions changing from cloudy to sunny; Calibration of hyperspectral imagery was required for compensating the effect of varying weather conditions; The combination of hyperspectral imagery and photogrammetric point cloud data resulted in accurate forest estimates, especially for volumes per tree species.
Abstract | Full text in HTML | Full text in PDF | Author Info

Remote sensing using unmanned aerial vehicle (UAV) -borne sensors is currently a highly interesting approach for the estimation of forest characteristics. 3D remote sensing data from airborne laser scanning or digital stereo photogrammetry enable highly accurate estimation of forest variables related to the volume of growing stock and dimension of the trees, whereas recognition of tree species dominance and proportion of different tree species has been a major complication in remote sensing-based estimation of stand variables. In this study the use of UAV-borne hyperspectral imagery was examined in combination with a high-resolution photogrammetric canopy height model in estimating forest variables of 298 sample plots. Data were captured from eleven separate test sites under weather conditions varying from sunny to cloudy and partially cloudy. Both calibrated hyperspectral reflectance images and uncalibrated imagery were tested in combination with a canopy height model based on RGB camera imagery using the k-nearest neighbour estimation method. The results indicate that this data combination allows accurate estimation of stand volume, mean height and diameter: the best relative RMSE values for those variables were 22.7%, 7.4% and 14.7%, respectively. In estimating volume and dimension-related variables, the use of a calibrated image mosaic did not bring significant improvement in the results. In estimating the volumes of individual tree species, the use of calibrated hyperspectral imagery generally brought marked improvement in the estimation accuracy; the best relative RMSE values for the volumes for pine, spruce, larch and broadleaved trees were 34.5%, 57.2%, 45.7% and 42.0%, respectively.

  • Tuominen, Natural Resources Institute Finland (Luke), Economics and society, P.O. Box 2, FI-00791 Helsinki, Finland ORCID http://orcid.org/0000-0001-5429-3433 E-mail: sakari.tuominen@luke.fi (email)
  • Balazs, Natural Resources Institute Finland (Luke), Economics and society, P.O. Box 2, FI-00791 Helsinki, Finland E-mail: andras.balazs@luke.fi
  • Honkavaara, Finnish Geospatial Research Institute, National Land Survey of Finland, Geodeetinrinne 2, FI-02430 Masala, Finland E-mail: eija.honkavaara@nls.fi
  • Pölönen, University of Jyväskylä, Faculty of Information Technology, P.O. Box 35, FI-40014 Jyväskylä, Finland E-mail: ilkka.polonen@jyu.fi
  • Saari, VTT Microelectronics, P.O. Box 1000, FI-02044 VTT, Finland E-mail: heikki.saari@vtt.fi
  • Hakala, Finnish Geospatial Research Institute, National Land Survey of Finland, Geodeetinrinne 2, FI-02430 Masala, Finland E-mail: teemu.hakala@nls.fi
  • Viljanen, Finnish Geospatial Research Institute, National Land Survey of Finland, Geodeetinrinne 2, FI-02430 Masala, Finland E-mail: niko.viljanen@nls.fi

Category : Research note

article id 10600, category Research note
Nea Kuusinen, Aarne Hovi, Miina Rautiainen. (2021). Contribution of woody elements to tree level reflectance in boreal forests. Silva Fennica vol. 55 no. 5 article id 10600. https://doi.org/10.14214/sf.10600
Keywords: reflectance model; bark; hyperspectral; spectral mixture analysis
Highlights: Contribution of woody elements to reflectance of boreal tree species was estimated using spectral mixture analysis and airborne hyperspectral data; Mean woody element contribution varied between 0.14–0.19 (Scots pine), 0.12–0.20 (birches) and 0.09–0.10 (Norway spruce).
Abstract | Full text in HTML | Full text in PDF | Author Info

Spectral mixture analysis was used to estimate the contribution of woody elements to tree level reflectance from airborne hyperspectral data in boreal forest stands in Finland. Knowledge of the contribution of woody elements to tree or forest reflectance is important in the context of lea area index (LAI) estimation and, e.g., in the estimation of defoliation due to insect outbreaks, from remote sensing data. Field measurements from four Scots pine (Pinus sylvestris L.), five Norway spruce (Picea abies (L.) Karst.) and four birch (Betula pendula Roth and Betula pubescens Ehrh.) dominated plots, spectral measurements of needles, leaves, bark, and forest floor, airborne hyperspectral as well as airborne laser scanning data were used together with a physically-based forest reflectance model. We compared the results based on simple linear combinations of measured bark and needle/leaf spectra to those obtained by accounting for multiple scattering of radiation within the canopy using a physically-based forest reflectance model. The contribution of forest floor to reflectance was additionally considered. The resulted mean woody element contribution estimates varied from 0.140 to 0.186 for Scots pine, from 0.116 to 0.196 for birches and from 0.090 to 0.095 for Norway spruce, depending on the model used. The contribution of woody elements to tree reflectance had a weak connection to plot level forest variables.

  • Kuusinen, Department of Built Environment, School of Engineering, Aalto University, P.O. Box 14100, FI-00076 Aalto, Finland E-mail: nea.kuusinen@aalto.fi (email)
  • Hovi, Department of Built Environment, School of Engineering, Aalto University, P.O. Box 14100, FI-00076 Aalto, Finland E-mail: aarne.hovi@aalto.fi
  • Rautiainen, Department of Built Environment, School of Engineering, Aalto University, P.O. Box 14100, FI-00076 Aalto, Finland; Department of Electronics and Nanoengineering, School of Electrical Engineering, Aalto University, P.O. Box 15500, FI-00076 Aalto, Finland ORCID https://orcid.org/0000-0002-6568-3258 E-mail: miina.a.rautiainen@aalto.fi

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